<?xml version="1.0" encoding="utf-8" standalone="yes"?><rss version="2.0" xmlns:atom="http://www.w3.org/2005/Atom" xmlns:content="http://purl.org/rss/1.0/modules/content/"><channel><title>Robert's Bytes</title><link>https://pubs.onrender.com/</link><description>Recent content on Robert's Bytes</description><generator>Hugo</generator><language>en</language><lastBuildDate>Mon, 27 Apr 2026 00:00:00 +0000</lastBuildDate><atom:link href="https://pubs.onrender.com/index.xml" rel="self" type="application/rss+xml"/><item><title>Integration of human transcriptome and cardiac systems models</title><link>https://pubs.onrender.com/posts/personalized_models/</link><pubDate>Fri, 30 Jun 2023 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/personalized_models/</guid><description>Study of the impact of signaling pathway alterations in heart disease</description></item><item><title>ReconBench: benchmarking LLMs on cardiac signaling network reconstruction</title><link>https://pubs.onrender.com/posts/reconbench/</link><pubDate>Mon, 27 Apr 2026 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/reconbench/</guid><description>An Inspect-native replication and extension of Tewari et al. (2025). Recall reproduces, precision and F1 are new, and the main failure traces to an extraction format mismatch rather than a reasoning gap.</description></item><item><title>Beyond sequence similarity: function-aware screening of synthesized DNA</title><link>https://pubs.onrender.com/posts/beyond_sequence_similarity/</link><pubDate>Fri, 24 Apr 2026 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/beyond_sequence_similarity/</guid><description>Protein and DNA foundation models add a function-level screening layer that is robust to disguise. An ensemble of ESM-2 and Evo2 7B catches 85.8% of toxins at a 1-in-100 false-alarm rate, complementing, not replacing, the alignment-based policy screens used today.</description></item><item><title>Treasury Reapers: Sentient Arena Challenge 0 final report</title><link>https://pubs.onrender.com/posts/treasury_reapers/</link><pubDate>Wed, 08 Apr 2026 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/treasury_reapers/</guid><description>Final report for my Treasury Reapers team submission to Sentient Arena Challenge 0: a goose-based OfficeQA agent, prompt and skill-contract iterations, leaderboard progression, and lessons from trace-driven optimization.</description></item><item><title>Porting scBench to inspect_evals: lessons from running AI agents on single-cell data</title><link>https://pubs.onrender.com/posts/scbench_inspect_evals/</link><pubDate>Thu, 02 Apr 2026 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/scbench_inspect_evals/</guid><description>Lessons from moving scBench&amp;rsquo;s public task set into the inspect_evals framework, including scoring rules, evaluation setup, and what run logs revealed.</description></item><item><title>Don't build the router yet: a cheap test for monitor ensembles</title><link>https://pubs.onrender.com/posts/monitor_routing/</link><pubDate>Sat, 21 Mar 2026 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/monitor_routing/</guid><description>AI control teams often propose routing one monitor for subtle attacks and another for obvious ones. Before such a router is built, a three-step diagnostic on existing logs can show whether it can help. On AgentDojo, it cannot.</description></item><item><title>Mechanistic interpretability of chain-of-thought prompting</title><link>https://pubs.onrender.com/posts/mechinterp_cot/</link><pubDate>Sun, 02 Feb 2025 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/posts/mechinterp_cot/</guid><description>Exploration of mechinterp from a newbie perspective</description></item><item><title>Frequently asked questions</title><link>https://pubs.onrender.com/faq/</link><pubDate>Mon, 01 Jan 0001 00:00:00 +0000</pubDate><guid>https://pubs.onrender.com/faq/</guid><description/></item></channel></rss>